Genome-Wide Identification of Banana Csl Gene Family and Their Different Responses to Low Temperature between Chilling-Sensitive and Tolerant Cultivars
文献类型： 外文期刊
作者： Yuan, Weina 1 ; Liu, Jing 1 ; Takac, Tomas 2 ; Chen, Houbin 1 ; Li, Xiaoquan 3 ; Meng, Jian 1 ; Tan, Yehuan 1 ; Ning, Ton 1 ;
作者机构： 1.South China Agr Univ, Coll Hort, Dept Pomol, Guangzhou 510642, Peoples R China
2.Palacky Univ Olomouc, Czech Adv Technol & Res Inst, Ctr Reg Hana Biotechnol & Agr Res, Olomouc 78375, Czech Republic
3.Guangxi Acad Agr Sci, Inst Biotechnol, Nanning 530007, Peoples R China
4.Guangdong Acad Agr Sci, Inst Fruit Tree Res, Guangzhou 510640, Peoples R China
关键词： banana (Musa spp; ); cellulose synthase-like genes; genome-wide identification; hemicellulose; low temperature stress
期刊名称：PLANTS-BASEL （ 影响因子：3.935； ）
ISSN：
年卷期： 2021 年 10 卷 1 期
页码：
收录情况： SCI
摘要： The cell wall plays an important role in responses to various stresses. The cellulose synthase-like gene (Csl) family has been reported to be involved in the biosynthesis of the hemicellulose backbone. However, little information is available on their involvement in plant tolerance to low-temperature (LT) stress. In this study, a total of 42 Csls were identified in Musa acuminata and clustered into six subfamilies (CslA, CslC, CslD, CslE, CslG, and CslH) according to phylogenetic relationships. The genomic features of MaCsl genes were characterized to identify gene structures, conserved motifs and the distribution among chromosomes. A phylogenetic tree was constructed to show the diversity in these genes. Different changes in hemicellulose content between chilling-tolerant and chilling-sensitive banana cultivars under LT were observed, suggesting that certain types of hemicellulose are involved in LT stress tolerance in banana. Thus, the expression patterns of MaCsl genes in both cultivars after LT treatment were investigated by RNA sequencing (RNA-Seq) technique followed by quantitative real-time PCR (qPCR) validation. The results indicated that MaCslA4/12, MaCslD4 and MaCslE2 are promising candidates determining the chilling tolerance of banana. Our results provide the first genome-wide characterization of the MaCsls in banana, and open the door for further functional studies.
- 相关文献
作者其他论文 更多>>
-
Genome-Wide Genomic Analysis and Evolutionary Insights into Bovine Coronavirus Strains in Southwest China
作者：Li, Qingqing;Bai, Huili;Wu, Cuilan;Ma, Chunxia;Wei, Tianchao;Bai, Huili;Liao, Yuying;Wu, Cuilan;Ma, Chunxia;Chen, Zhongwei;Li, Changting;Yin, Yangyan;Teng, Ling;Wang, Leping;Peng, Hao;Bai, Huili;Liao, Yuying;Wu, Cuilan;Ma, Chunxia;Chen, Zhongwei;Li, Changting;Yin, Yangyan;Teng, Ling;Wang, Leping;Peng, Hao;Pan, Yan;Pei, Zhe;Gong, Yu;Liu, Jing;Zhang, Ezhen
关键词：bovine coronavirus; whole-genome sequencing; cross-species transmission; genetic evolution analysis
-
Genomic and stress resistance characterization of Lactiplantibacillus plantarum GX17, a potential probiotic for animal feed applications
作者：Yin, Yangyan;Li, Chunling;Bai, Huili;Ma, Chunxia;Lan, Meiyi;Teng, Ling;Yin, Yangyan;Li, Chunling;Li, Changting;Chen, Zhongwei;Bai, Huili;Ma, Chunxia;Lan, Meiyi;Li, Jun;Teng, Ling;Wang, Leping;Qin, Zhongsheng;Peng, Hao;Yin, Yangyan;Li, Chunling;Li, Changting;Chen, Zhongwei;Bai, Huili;Ma, Chunxia;Lan, Meiyi;Li, Jun;Teng, Ling;Wang, Leping;Qin, Zhongsheng;Peng, Hao;Pei, Zhe;Gong, Yu;Liu, Jing;Zhang, Ezhen
关键词：
Lactiplantibacillus plantarum GX17; genome-wide; gene prediction; stress resistance genes; stress resistance -
Alterations in arabinogalactan proteins in banana peel during fruit development and ripening
作者：Gulzar, Shazma;Yi, Zan;Sharif, Rahat;Liu, Jing;Ning, Tong;Xu, Chunxiang;Liu, Jing;Li, Xiaoquan;Su, Zuxiang
关键词：Arabinogalactan proteins (AGPs); fruit ripening; banana (Musa sp. AAA); fruit development; immunofluorescence labelling; RNA-Seq
-
The SOC1 gene plays an important role in regulating litchi flowering time
作者：Zhang, Shuwei;Li, Ming;Yi, Chenxin;Guo, Huiqin;Ding, Feng;Shi, Yuyu;Gui, Qiulin;Qing, Haowei;Xu, Jiongzhi;Chen, Houbin
关键词：Litchi; LcSOC1 gene; Flowering time; Molecular breeding
-
Genome-wide identification of XTH gene family in Musa acuminata and response analyses of MaXTHs and xyloglucan to low temperature
作者：Tan, Yehuan;Zhan, Huiling;Chen, Houbin;Chen, Chengjie;Liu, Hui;Chen, Yilin;Zhao, Ziyue;Xiao, Yinyan;Liu, Jing;Zhao, Yafang;Xu, Chunxiang;Chen, Houbin;Li, Xiaoquan;Su, Zuxiang;Tan, Yehuan
关键词：
-
Insight into the mechanism of nano-TiO2-doped biochar in mitigating cadmium mobility in soil-pak choi system
作者：Liu, Jing;Yang, Zhixing;Peng, Shirui;Lu, Dan;Li, Qiaoxian;Feng, Yaxuan;Chen, Kuiyuan;Wei, Yanyan;Liu, Jing;He, Tieguang;Yang, Zhixing;Zhu, Yanhuan;Li, Hong
关键词：Nanoparticles; Biochar; Cadmium; Microbial community; Soil metabolism; Soil remediation
-
The development and utilization of two SCAR markers linked to the resistance of banana (Musa spp. AAA) to Fusarium oxysporum f. sp. cubense race 4
作者：Qv, Mengran;Feng, Guoen;Chen, Shule;Chen, Houbin;Chen, Chengjie;Dai, Longyu;Liu, Hui;Xu, Chunxiang;Chen, Houbin;Wang, Fang;Lv, Shun;Huang, Bingzhi;Li, Xiaoquan;Su, Zuxiang
关键词：Banana (Musa spp. AAA Cavendish); Molecular marker assistant breeding; Fusarium wilt; SCAR markers
