Complete sequence of kenaf (Hibiscus cannabinus) mitochondrial genome and comparative analysis with the mitochondrial genomes of other plants
文献类型： 外文期刊
作者： Liao, Xiaofang 1 ; Zhao, Yanhong 2 ; Kong, Xiangjun 1 ; Khan, Aziz 1 ; Zhou, Bujin 1 ; Liu, Dongmei 3 ; Kashif, Muhamm 1 ;
作者机构： 1.Guangxi Univ, Coll Agr, Key Lab Plant Genet & Breeding, Nanning 530005, Peoples R China
2.Guangxi Acad Agr Sci, Cash Crop Inst, Nanning 530007, Peoples R China
3.Shangqiu Normal Univ, Dept Life Sci & Food, Key Lab Plant Microbe Interact, Shangqiu 476000, Peoples R China
4.Univ Saskatchewan, Dept Biochem, Saskatoon, SK S7N5E5, Canada
期刊名称：SCIENTIFIC REPORTS （ 影响因子：4.379； 五年影响因子：5.133 ）
ISSN： 2045-2322
年卷期： 2018 年 8 卷
页码：
收录情况： SCI
摘要： Plant mitochondrial (mt) genomes are species specific due to the vast of foreign DNA migration and frequent recombination of repeated sequences. Sequencing of the mt genome of kenaf (Hibiscus cannabinus) is essential for elucidating its evolutionary characteristics. In the present study, singlemolecule real-time sequencing technology (SMRT) was used to sequence the complete mt genome of kenaf. Results showed that the complete kenaf mt genome was 569,915 bp long and consisted of 62 genes, including 36 protein-coding, 3 rRNA and 23 tRNA genes. Twenty-five introns were found among nine of the 36 protein-coding genes, and five introns were trans-spliced. A comparative analysis with other plant mt genomes showed that four syntenic gene clusters were conserved in all plant mtDNAs. Fifteen chloroplast-derived fragments were strongly associated with mt genes, including the intact sequences of the chloroplast genes psaA, ndhB and rps7. According to the plant mt genome evolution analysis, some ribosomal protein genes and succinate dehydrogenase genes were frequently lost during the evolution of angiosperms. Our data suggest that the kenaf mt genome retained evolutionarily conserved characteristics. Overall, the complete sequencing of the kenaf mt genome provides additional information and enhances our better understanding of mt genomic evolution across angiosperms.
- 相关文献
作者其他论文 更多>>
-
Molecular Cloning and Heterologous Expression of the Mitochondrial ATP6 Gene from Kenaf (Hibiscus cannabinus) in Tobacco (Nicotiana tabacum)
作者：Huang, Bangbang;Zhou, Ruiyang;Wei, Rongchang;Hou, Wenhuan;Tang, Xingfu;Zhao, Yanhong;Liao, Xiaofang;Wei, Meiling
关键词：kenaf; cytoplasmic male sterility;
atp6 ; construction of overexpression vectors; transformation -
Differences in homologous and heterologous nucleocytoplasmic interactions of cytoplasmic male sterility lines in Gossypium barbadense
作者：You, Jingyi;Li, Bin;Zhou, Qiong;Zhou, Ruiyang;You, Jingyi;Li, Min;Kong, Xiangjun;Hou, Qingguang;Li, Hongwei
关键词：Cotton; CMS line with homologous cytoplasm and its nucleus; CMS line with heterologous cytoplasm and its nucleus; Mitochondrial genome; Reactive oxygen species; Mitochondrial genome structural variation
-
Genome-wide characterization of GRF-GIF transcriptional modules in kenaf (Hibiscus cannabinus L.) reveals their roles in plant development and multi-stress adaptation
作者：Yue, Jiao;Wu, Qijing;Tan, Yuqi;Wang, Qiuping;Wei, Rujian;Wang, Xu;Luo, Dengjie;Chen, Peng;Chen, Tao
关键词：Kenaf (
Hibiscus cannabinus L.); Growth-regulating factor (GRF);GRF -interacting factor (GIF); VIGS; Overexpression -
Physiological and Transcriptome Analysis Reveal the Underlying Mechanism of Salicylic Acid-Alleviated Drought Stress in Kenaf (Hibiscus cannabinus L.)
作者：Zhang, Hui;Xu, Guofeng;Mubeen, Samavia;Wei, Rujian;Rehman, Muzammal;Cao, Shan;Wang, Caijin;Yue, Jiao;Pan, Jiao;Chen, Peng;Zhang, Hui;Li, Ru;Jin, Gang;Chen, Tao
关键词：kenaf; drought stress; salicylic acid; transcriptome; VIGS
-
Characterization and transcriptomic analysis provide novel insights into the sexual differentiation of the dioecious plant Bama Huoma (Cannabis sativa)
作者：Liao, Xiaofang;Hou, Wenhuan;Tang, Xingfu;Zhao, Yanhong;Teng, Kailiang;Huang, Bangbang;Zheng, Jie;Tan, Jie
关键词：Bama Huoma (Cannabis sativa subsp. sativa); Dioecism; Sex differentiation; MADS-box genes; Transcriptional regulation
-
Exogenous nitric oxide alleviates cadmium toxicity in kenaf ( Hibiscus cannabinus L.) through modulating Cd deposition and regulating key genes and involved pathways
作者：Cao, Shan;Pan, Jiao;Rehman, Muzammal;Luo, Dengjie;Wang, Qiuping;Chen, Peng;Li, Ru;Jin, Gang;Chen, Tao
关键词：Nitric oxide; Cadmium stress; Detoxification; Transcriptome; HcERF.C3 gene; Kenaf ( Hibiscus cannabinus L.)
-
Morpho-physio-biochemical, molecular, and phytoremedial responses of plants to red, blue, and green light: a review
作者：Rehman, Muzammal;Pan, Jiao;Mubeen, Samavia;Ma, Wenyue;Luo, Dengjie;Cao, Shan;Saeed, Wajid;Chen, Peng;Rehman, Muzammal;Pan, Jiao;Mubeen, Samavia;Ma, Wenyue;Luo, Dengjie;Cao, Shan;Saeed, Wajid;Chen, Peng;Li, Ru;Jin, Gang;Chen, Tao
关键词：Eco-friendly lighting; Morpho-physiological responses; Phytoremediation; Disease control; Fruit quality
