The complete chloroplast genome sequences of an endangered orchid species Paphiopedilum wenshanense (Orchidaceae)
文献类型： 外文期刊
作者： Liao, Hongying 1 ; Fan, Jizheng 1 ; Li, Xiuling 1 ; Li, Mingzhi 2 ; Ning, Yunfen 3 ;
作者机构： 1.Guangxi Acad Agr Sci, Flower Res Inst, Nanning, Peoples R China
2.Bio & Data Biotechnol Co Ltd, Guangzhou, Peoples R China
3.Guangxi Univ, Coll Agr, Nanning, Peoples R China
关键词： Paphiopedilum wenshanense; complete chloroplast genome; genome assembly; phylogenetic tree
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.61； 五年影响因子：0.628 ）
ISSN：
年卷期： 2022 年 7 卷 11 期
页码：
收录情况： SCI
摘要： Paphiopedilum wenshanense, a species of the family Orchidaceae, is endangered in the world with highly ornamental and biological value, the morphology of P. wenshanense is very similar to its relative species, P. bellatulum and P. concolor. However, there are few studies on the molecular biology and phylogeny of this species currently. Therefore, we report its complete chloroplast (cp) genome sequence at the first time, hoping to provide a foundation for its future phylogenetic analysis. The complete chloroplast genome of P. wenshanense was 161,750 bp in size, which contained a large single-copy (LSC) region of 90,656 bp, a small single-copy (SSC) region of 1886 bp, and two inverted repeat (IR) regions of 34,604 bp each. The total GC content was 35.66%. The genome encodes 38 transfer RNA genes, eight ribosomal RNA genes, and 80 protein-coding genes. The phylogenetic analysis indicated that the genetic relationship between P. wenshanense and P. concolor was very close.
- 相关文献
作者其他论文 更多>>
-
Comparative transcriptome analysis identified important genes and regulatory pathways for flower color variation in Paphiopedilum hirsutissimum
作者：Li, Xiuling;Fan, Jizheng;Luo, Shuming;Liao, Hongying;Cui, Xueqiang;He, Jingzhou;Zeng, Yanhua;Bu, Zhaoyang;Yin, Ling;Qu, Junjie
关键词：Paphiopedilum hirsutissimum; Albino; Anthocyanin; Carotenoids; Flower color; Comparative transcriptome
-
Transcriptomic Analysis of the Anthocyanin Biosynthetic Pathway Reveals the Molecular Mechanism Associated with Purple Color Formation in Dendrobium Nestor
作者：Cui, Xueqiang;Deng, Jieling;Huang, Changyan;Tang, Xuan;Li, Xianmin;Li, Xiuling;Lu, Jiashi;Zhang, Zibin
关键词：orchid; pigmentation; anthocyanin biosynthesis; gene coexpression; transcription factors
-
Genome-Wide Identification and Analysis of NAC Transcription Factor Family in Two Diploid Wild Relatives of Cultivated Sweet Potato Uncovers Potential NAC Genes Related to Drought Tolerance
作者：Yan, Haifeng;Qiu, Lihang;Zhou, Huiwen;Wu, Jianming;Yan, Haifeng;Qiu, Lihang;Zhou, Huiwen;Wu, Jianming;Ma, Guohua;Xu, Juan;Wei, Minzheng;Xiong, Jun;Tang, Xiuhua;Li, Mingzhi;Zhou, Shaohuan
关键词：NAC transcription factor; diploid sweet potato; drought stress; expression; 3D structure
-
Genome-Wide Characterization, Expression Profile Analysis of WRKY Family Genes in Santalum album and Functional Identification of Their Role in Abiotic Stress
作者：Yan, Haifeng;Wu, Jianming;Li, Mingzhi;Xiong, Yuping;Ma, Guohua;da Silva, Jaime A. Teixeira
关键词：WRKY transcription factor; sandalwood; SA (salicylic acid); MeJA (methyl jasmonate); salt tolerance
