您好，欢迎访问广西农业科学院 机构知识库！

Chromosome-level and graphic genomes provide insights into metabolism of bioactive metabolites and cold-adaption of Pueraria lobata var. montana

文献类型： 外文期刊

作者： Mo, Changjuan 1 ; Wu, Zhengdan 2 ; Shang, Xiaohong 2 ; Shi, Pingli 2 ; Wei, Minghua 1 ; Wang, Haiyan 1 ; Xiao, Liang 2 ; Cao, Sheng 2 ; Lu, Liuying 2 ; Zeng, Wendan 2 ; Yan, Huabing 2 ; Kong, Qiusheng 1 ;

作者机构： 1.Huazhong Agr Univ, Coll Hort & Forestry Sci, Key Lab Hort Plant Biol, Minist Educ, Wuhan 430070, Peoples R China

2.Guangxi Acad Agr Sci, Cash Crops Res Inst, Nanning 530007, Peoples R China

3.Guangxi Univ, State Key Lab Conservat & Utilizat Subtrop Agrobi, Nanning 530007, Peoples R China

关键词： Pueraria lobata var; montana; chromosomal-level genome; graphic genome; comparative genomics; structural variants

期刊名称：DNA RESEARCH （ 影响因子：4.477； 五年影响因子：5.358 ）

ISSN： 1340-2838

年卷期： 2022 年 29 卷 5 期

页码：

收录情况： SCI

摘要： Pueraria lobata var. montana (P. montana) belongs to the genus Pueraria and originated in Asia. Compared with its sister P. thomsonii, P. montana has stronger growth vigour and cold-adaption but contains less bioactive metabolites such as puerarin. To promote the investigation of metabolic regulation and genetic improvement of Pueraria, the present study reports a chromosome-level genome of P. montana with length of 978.59 Mb and scaffold N50 of 80.18 Mb. Comparative genomics analysis showed that P. montana possesses smaller genome size than that of P. thomsonii owing to less repeat sequences and duplicated genes. A total of 6,548 and 4,675 variety-specific gene families were identified in P. montana and P. thomsonii, respectively. The identified variety-specific and expanded/contracted gene families related to biosynthesis of bioactive metabolites and microtubules are likely the causes for the different characteristics of metabolism and cold-adaption of P. montana and P. thomsonii. Moreover, a graphic genome was constructed based on 11 P. montana accessions. Total 92 structural variants were identified and most of which are related to stimulus-response. In conclusion, the chromosome-level and graphic genomes of P. montana will not only facilitate the studies of evolution and metabolic regulation, but also promote the breeding of Pueraria.

  • 相关文献
作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：广西农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台