Pitaya Genome and Multiomics Database (PGMD): A Comprehensive and Integrative Resource of Selenicereus undatus
文献类型： 外文期刊
作者： Chen, Canbin 1 ; Li, Fangping 2 ; Xie, Fangfang 1 ; Chen, Jiaxuan 1 ; Hua, Qingzhu 1 ; Chen, Jianye 1 ; Wu, Zhijiang 3 ; Zhang, Zhike 1 ; Zhang, Rong 1 ; Zhao, Jietang 1 ; Hu, Guibing 1 ; Qin, Yonghua 1 ;
作者机构： 1.South China Agr Univ, Coll Hort, Key Lab South China Hort Crop Biol & Germplasm En, Minist Agr,Guangdong Prov Key Lab Postharvest Sci, Guangzhou 510642, Peoples R China
2.South China Agr Univ, State Key Lab Conservat & Utilizat Subtrop Agrobi, Guangdong Prov Key Lab Plant Mol Breeding, Guangzhou 510642, Peoples R China
3.Guangxi Acad Agr Sci, Inst Hort Res, Nanning 530007, Peoples R China
关键词： pitaya; comprehensive database; PGMD
期刊名称：GENES （ 影响因子：4.141； 五年影响因子：4.474 ）
ISSN：
年卷期： 2022 年 13 卷 5 期
页码：
收录情况： SCI
摘要： Pitaya (Selenicereus) is a kind of novel fruit with a delicious taste and superior horticulture ornamental value. The potential economic impact of the pitaya lies in its diverse uses not only as agricultural produce and processed foods but also in industrial and medicinal products. It is also an excellent plant material for basic and applied biological research. A comprehensive database of pitaya would facilitate studies of pitaya and the other Cactaceae plant species. Here, we constructed pitaya genome and multiomics database, which is a collection of the most updated and high-quality pitaya genomic assemblies. The database contains various information such as genomic variation, gene expression, miRNA profiles, metabolite and proteomic data from various tissues and fruit developmental stages of different pitaya cultivars. In PGMD, we also uploaded videos on the flowering process and planting tutorials for practical usage of pitaya. Overall, these valuable data provided in the PGMD will significantly facilitate future studies on population genetics, molecular breeding and function research of pitaya.
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